Human myotendinous junction snRNAseq

Main

Cell Metadata

MTJ

Ontology Term: myotendinous junction nucleusCL:4052024
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: extrafusal muscle fiberCL:0008046
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: COL22A1, NCAM1, SORBS2, MYH1, MYH2, MYH7
Canonical Marker Genes: unknown
Rationale: Cluster annotated based on expression of COL22A1, NCAM1 and SORBS2

Set of Labels Description: Main nuclei types were defined using FindNeighbours, based on principal component analysis (PCA; 30 dimensions), and the Seurat graph-based method FindClusters, for clustering using manually selected resolution between 0.2 and 0.9 for best separations.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: myotendinous junction nucleusCL:4052024
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: extrafusal muscle fiberCL:0008046
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: COL22A1, NCAM1, SORBS2, MYH1, MYH2, MYH7
Canonical Marker Genes: unknown
Rationale: Cluster annotated based on expression of COL22A1, NCAM1 and SORBS2

Set of Labels Description: Main nuclei types were defined using FindNeighbours, based on principal component analysis (PCA; 30 dimensions), and the Seurat graph-based method FindClusters, for clustering using manually selected resolution between 0.2 and 0.9 for best separations.
Annotation Method: manual