Human myotendinous junction snRNAseq

Main

Cell Metadata

Smooth

Ontology Term: smooth muscle cellCL:0000192
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: visceral muscle cellCL:0008007
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ACTA2, MYH11, RGS5
Canonical Marker Genes: unknown
Rationale: Smooth muscle cluster annotated based on expression of ACTA2, MYH11 and RGS5.

Set of Labels Description: Main nuclei types were defined using FindNeighbours, based on principal component analysis (PCA; 30 dimensions), and the Seurat graph-based method FindClusters, for clustering using manually selected resolution between 0.2 and 0.9 for best separations.
Annotation Method: manual

Ontology Term: smooth muscle cellCL:0000192
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: visceral muscle cellCL:0008007
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ACTA2, MYH11, RGS5
Canonical Marker Genes: unknown
Rationale: Smooth muscle cluster annotated based on expression of ACTA2, MYH11 and RGS5.

Set of Labels Description: Main nuclei types were defined using FindNeighbours, based on principal component analysis (PCA; 30 dimensions), and the Seurat graph-based method FindClusters, for clustering using manually selected resolution between 0.2 and 0.9 for best separations.
Annotation Method: manual