snRNA-seq of human optic nerve and optic nerve head - all cells
OPC_RNF220+
- Ontology Term
- oligodendrocyte precursor cellCL:0002453
- SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.
- OPC RNF220+, oligodendrocyte precursor cell RNF220+
- CategoryClass of which the cell type is a subclass.
- progenitor cellCL:0011026
- Ontology AssessmentDisagreements with any aspect of the Cell Ontology.
- —
- Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.
- CSMD1, TNR, BCAS1, RNF220
- Rationale
- An oligodendrocyte precursor cell sub class that expresses CSMD1, TNR, BCAS1, and RNF220
Inherited from author_cell_type
- Set of Labels Description
- We used scVI for data integration and then manually annotated each cell cluster based on marker gene expression
- Annotation Method
- both
- Algorithm Name
- scVI
- Algorithm Version
- scvi-tools 1.3.0
- Algorithm URL
- https://github.com/scverse/scvi-tools