Healthy and adjacent-to-disease control data from 27 gut single-cell RNAseq datasets were collected and integrated to form v1 of the Human Gut Cell Atlas myeloid lineage
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 50,047
- assay
- 10x 3' v3 (31,693 cells)10x 3' v2 (12,958 cells)10x 5' v1 (2,763 cells)10x 5' v2 (2,595 cells)10x 5' v3 (38 cells)
- disease
- normal (33,033 cells)Crohn disease (11,890 cells)digestive system disorder (3,332 cells)colorectal cancer (1,461 cells)enteritis (331 cells)
- organism
- Homo sapiens
- tissue
- ileum (23,150 cells)jejunum (17,177 cells)colon (3,569 cells)ascending colon (1,768 cells)caecum (1,035 cells)transverse colon (966 cells)rectum (877 cells)sigmoid colon (801 cells)duodenum (517 cells)gastrointestinal system mesentery (80 cells)descending colon (51 cells)vermiform appendix (34 cells)small intestine (22 cells)
