The Human Neural Organoid Atlas

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Cell Metadata

Dorsal Telencephalic Neuron

Ontology Term: cerebral cortex pyramidal neuronCL:4023111
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: cerebral cortex neuronCL:0010012
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: FOXG1, EMX1, SLC17A7
Canonical Marker Genes: FOXG1, EMX1, SLC17A7
Rationale: Cells expressing canonical dorsal telencephalic neuron markers in organoids.

Set of Labels Description: Finer curated cell type annotation of the integrated HNOCA.
Annotation Method: both
Algorithm Name: snapseed
Algorithm Version: 0.1.0
Algorithm URL: https://github.com/devsystemslab/snapseed

Ontology Term: cerebral cortex pyramidal neuronCL:4023111
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: cerebral cortex neuronCL:0010012
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: FOXG1, EMX1, SLC17A7
Canonical Marker Genes: FOXG1, EMX1, SLC17A7
Rationale: Cells expressing canonical dorsal telencephalic neuron markers in organoids.

Set of Labels Description: Finer curated cell type annotation of the integrated HNOCA.
Annotation Method: both
Algorithm Name: snapseed
Algorithm Version: 0.1.0
Algorithm URL: https://github.com/devsystemslab/snapseed