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Cross-species Spinal Cord Atlas: Glutamatergic | CAP
v2
Consensus Spinal Cord Atlas
Cross-species Spinal Cord Atlas: Glutamatergic
Cross-species Spinal Cord Atlas: Glutamatergic
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Summary
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Cell Metadata
Class
Subclass
Group
Cluster
Summary
HMBA/AIBS: Cross-species Spinal Cord
Metadata
Dataset Type
Integrated. The file includes an integrated collection of datasets.
Total Cells
57,219
organism
Mus musculus
(30,586 cells)
Macaca mulatta
(24,425 cells)
Homo sapiens
(2,208 cells)
disease
normal
assay
10x multiome
tissue
Spinal cord
anatomical_region
Lumbar
(15,125 cells)
Cervical
(14,664 cells)
Sacral
(14,622 cells)
Thoracic
(12,271 cells)
unknown
(537 cells)
species
Mouse
(30,586 cells)
Macaque
(24,425 cells)
Human
(2,208 cells)
nearest_development_origin
dl5
(17,840 cells)
dl1
(11,651 cells)
nan
(8,998 cells)
dl2
(6,792 cells)
V0
(3,584 cells)
dl3
(2,194 cells)
V2a
(1,548 cells)
V3
(1,470 cells)
MN
(1,427 cells)
V1
(788 cells)
Outliers
(225 cells)
dp6
(214 cells)
V2b
(144 cells)
Null_Neuron
(92 cells)
dl6
(59 cells)
pMN
(46 cells)
FP
(32 cells)
dp1
(28 cells)
RP
(19 cells)
dl4
(17 cells)
Null_Progenitor
(12 cells)
p2
(9 cells)
p3
(9 cells)
dp2
(7 cells)
dp3
(5 cells)
p1
(5 cells)
dp4
(2 cells)
p0
(2 cells)
spinalcord_dissection
unknown
(32,794 cells)
Unbiased
(17,663 cells)
Ventral_horn
(6,762 cells)
donor_name
Mouse_1
(30,586 cells)
QN24.26.001
(8,615 cells)
QN24.26.004
(6,316 cells)
QN23.26.012
(3,197 cells)
QN23.26.001
(2,993 cells)
H20.30.002
(2,108 cells)
QN22.26.011
(1,855 cells)
QN22.26.016
(1,449 cells)
H19.30.001
(94 cells)
H19.30.003
(6 cells)
Cell Labels
Class
Description
Cell annotation set for Class
Annotation Method
manual
Cell Labels (2)
Cells (57,219)
Glutamatergic
56,875
GABA-Gluta
344
Subclass
Description
Cell annotation set for Subclass
Annotation Method
manual
Cell Labels (4)
Cells (57,219)
Gluta-D
34,322
Gluta-V
17,172
Gluta-M
5,381
GABA-Gluta
344
Group
Description
Cell annotation set for Group
Annotation Method
manual
Cell Labels (16)
Cells (57,219)
Gluta-V-1
17,172
Gluta-Dorsal-10
4,751
Gluta-Dorsal-4
4,196
Gluta-M-1
3,743
Gluta-Dorsal-3
3,444
Gluta-Dorsal-8
3,418
Gluta-Dorsal-5
3,348
Gluta-Dorsal-6
3,268
Gluta-Dorsal-12
2,716
Gluta-Dorsal-11
2,290
Gluta-Dorsal-7
2,134
Gluta-Dorsal-1
2,012
Cluster
Description
Cell annotation set for Cluster
Annotation Method
manual
Cell Labels (90)
Cells (57,219)
132
7,322
124
3,861
216
2,808
170
2,115
172
1,822
77
1,746
38
1,473
219
1,292
152
1,278
37
1,111
96
1,049
257
1,035
Molecular Data
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