Lymphoid cells from human liver dataset

Main

Cell Metadata

Treg

Ontology Term: regulatory T cellCL:0000815
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: Treg
Category Class of which the cell type is a subclass.: mature T cellCL:0002419
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: IL2RA, CTLA4, ICA1, TNFRSF4, AC017002.1, DUSP4, TBC1D4, TNFRSF18, ENTPD1, SNX9
Canonical Marker Genes: FOXP3
Rationale: Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S5 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual

Main

Cell Metadata

Ontology Term: regulatory T cellCL:0000815
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: Treg
Category Class of which the cell type is a subclass.: mature T cellCL:0002419
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: IL2RA, CTLA4, ICA1, TNFRSF4, AC017002.1, DUSP4, TBC1D4, TNFRSF18, ENTPD1, SNX9
Canonical Marker Genes: FOXP3
Rationale: Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S5 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual