Single-nucleus RNA-seq of Asian Skeletal Muscle Reveals Ancestry-specific Regulatory Programs Across Metabolic States

Main

Cell Metadata

satellite cells

Ontology Term: skeletal muscle satellite cellCL:0000594
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: muscle stem cell, MuSC
Category Class of which the cell type is a subclass.: skeletal muscle satellite cellCL:0000594
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PAX7, APOC1, APOE, MYF5
Canonical Marker Genes: PAX7, APOC1, APOE, MYF5
Rationale: Annotated based on canonical satellite cell/muscle stem cell markers from snRNA-seq differential expression analysis.

Set of Labels Description: Cell annotations are based on a Level 1 annotation scheme, assigning the most appropriate broad cell type label to each of the 11 clusters identified during integration.
Annotation Method: manual

Ontology Term: skeletal muscle satellite cellCL:0000594
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: muscle stem cell, MuSC
Category Class of which the cell type is a subclass.: skeletal muscle satellite cellCL:0000594
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PAX7, APOC1, APOE, MYF5
Canonical Marker Genes: PAX7, APOC1, APOE, MYF5
Rationale: Annotated based on canonical satellite cell/muscle stem cell markers from snRNA-seq differential expression analysis.

Set of Labels Description: Cell annotations are based on a Level 1 annotation scheme, assigning the most appropriate broad cell type label to each of the 11 clusters identified during integration.
Annotation Method: manual