Single-nucleus RNA-seq of Asian Skeletal Muscle Reveals Ancestry-specific Regulatory Programs Across Metabolic States

macrophage

Ontology Term

macrophageCL:0000235

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

tissue-resident macrophage

Category

Class of which the cell type is a subclass.

macrophageCL:0000235

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

CD163, CD74, ITGAX, MRC1, CD38, CD80, CD86, MSR1

Canonical Marker Genes

CD163, CD74, ITGAX, MRC1, CD38, CD80, CD86, MSR1

Rationale

Annotated based on canonical macrophage markers from snRNA-seq differential expression analysis.

Inherited from author_cell_type

Set of Labels Description

Cell annotations are based on a Level 1 annotation scheme, assigning the most appropriate broad cell type label to each of the 11 clusters identified during integration.

Annotation Method

manual