Single-nucleus RNA-seq of Asian Skeletal Muscle Reveals Ancestry-specific Regulatory Programs Across Metabolic States

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Cell Metadata

smooth muscle

Ontology Term: smooth muscle cellCL:0000192
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: vascular smooth muscle cell, SMC
Category Class of which the cell type is a subclass.: smooth muscle cellCL:0000192
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ACTA2, PRELP, MYH11, PLN
Canonical Marker Genes: ACTA2, PRELP, MYH11, PLN
Rationale: Annotated based on canonical smooth muscle cell markers from snRNA-seq differential expression analysis.

Set of Labels Description: Cell annotations are based on a Level 1 annotation scheme, assigning the most appropriate broad cell type label to each of the 11 clusters identified during integration.
Annotation Method: manual

Ontology Term: smooth muscle cellCL:0000192
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: vascular smooth muscle cell, SMC
Category Class of which the cell type is a subclass.: smooth muscle cellCL:0000192
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ACTA2, PRELP, MYH11, PLN
Canonical Marker Genes: ACTA2, PRELP, MYH11, PLN
Rationale: Annotated based on canonical smooth muscle cell markers from snRNA-seq differential expression analysis.

Set of Labels Description: Cell annotations are based on a Level 1 annotation scheme, assigning the most appropriate broad cell type label to each of the 11 clusters identified during integration.
Annotation Method: manual